Program
Presentation Guidelines
Please see this page for presentation guidelines.
Tentative schedule
🎤 = short talk, ⚡ = lightning talk, 🎙️ = keynote
Time Speaker Affiliation Presentation
8:00 ✅/☕ Registration and coffee (with some light food)
8:55 🎤 Chris Fiscus UCI Welcome to SCalE
9:00 🎤 Jordan Cahoon USC Imputation Efficacy Across Global Human Populations
9:15 🎤 Danielle Alarid ASU Towards an asynchronous Course-based Undergraduate Research Experience (CURE) framework: A pilot case study in remote genomics research
9:30 🎤 Peiwei Chen Caltech Two piRNA pathway elaborations tame intragenomic threats in opposite sexes
9:45 🎤 Daniel Pierce UCR Long-term Stability of a North American Avian Hybrid Zone
10:00 ⚡ Leila Lin UCI Prevalent fast evolution of proteins involved in heterochromatin functions
10:02 ⚡ Bryan Dinh USC Population-specific Recombination Maps Reduce False Positive Findings in Genomic Scans of Adaptations
10:04 ⚡ Soumyadeep Chatterjee UCR Tracking the SWS1 gene across bee hummingbirds
10:06 ⚡ Jon Mah UCLA Across-host population genetics analysis of common commensal gut microbiota suggests varied trends in demographic history
10:08 ⚡ Matthew Liu UCR Genome-wide association studies of courtship-related morphology in Anna’s hummingbirds
10:10 ⏱️ schedule catch up
10:15 ☕/🪧 Coffee + Posters (Even)
10:45 🎙️ Kate Ostevik & Rebeca Hernández Gutiérrez UCR Uncovering Genomic Signatures of Sexual Selection in Flowering Plants
11:20 🎤 Irene Liao UCLA Putative candidate genes underlying nectary development in monocots through comparative single nuclei RNA sequencing
11:35 🎤 Yuheng Huang UCI Epigenetic silencing of transposable elements contributes to variation in the recombination landscape
11:50 🎤 Daohan Jiang USC Decoupling of mRNA and protein abundances over macroevolutionary timescales
12:05 🌯/😋 Catered lunch (Tacos N Co), networking, and chance to view posters
13:35 🎤 Mariana Harris UCLA Enrichment of hard sweeps on the X chromosome across six Drosophila species
13:50 🎤 Marie Palanchon UCR Supergene-associated polygyny in ants: do small queens cheat?
14:05 🎤 Ryan Traband UCR Multiomics analysis uncovers connections between DNA variants, metabolites, and morphology in Citrus leaves
14:20 🎤 Dandan Peng USC Evaluation of the Ancestral Recombination Graph Estimation Methods for Estimating Population-mean Polygenic Score Histories
14:35 🎤 Bryan Clifton UCI Early functional evolution of a defective duplicate: Divergence of paralog transcriptional regulation prior to fixation within the species-specific tandem gene expansion Sdic
14:50 ⚡ Jill Marzolino UCR The response to selection across hundreds of traits in a century-long barley experiment
14:52 ⚡ Sam Mansour UCR Phylogenetic inference from low-coverage whole-genome sequences in bee hummingbirds
14:54 ⚡ Evan Shimota UCR Genetics of social structure and sex ratio in the ant Formica exsecta
14:56 ⚡ Michael Wasney UCLA Microbiome diversity along the tract of the gut
14:58 ⚡ Richard Wolff UCLA Long-term maintenance of fine-scale genetic diversity in the human gut microbiome
15:00 ⏱️ schedule catch up
15:05 ☕/🪧 Coffee + Posters (Odd)
15:35 🎤 Harsh Shukla UCI Genetic variation in recalcitrant repetitive genomic regions in Drosophila melanogaster
15:50 🎤 Alexandra Sumarli UCR Exploring genomic divergence between two sympatric stickleback ecotypes
16:05 🎤 Jennifer McIntyre UCI Diet-dependent epigenetic silencing of transposable elements
16:20 🎙️ Soojin Yi UCSB Supergenes, Steroid, and Balancing Selection in White-Throated Sparrows
17:00 Dinner on your own at University Town Center
Posters
# Presenter Affiliation Presentation
1 🪧 Taylor Beaulieu UCR A Survey of Clonal Genetic Diversity in Sweet Orange
2 🪧 Soumyadeep Chatterjee UCR Tracking the SWS1 gene across bee hummingbirds
3 🪧 Marcell Cadney UCSB The evolution of gene expression in the hippocampus of high runner mice after 100 generations of artificial selection
4 🪧 Bryan Dinh USC Population-specific Recombination Maps Reduce False Positive Findings in Genomic Scans of Adaptations
5 🪧 German Lagunas-Robles UCR Sex ratio supergene evolution across six species of Formica ants
6 🪧 Leila Lin UCI Prevalent fast evolution of proteins involved in heterochromatin functions
7 🪧 Peter Laurin UCLA Adaptation across host microbiomes using haplotype homozygosity
8 🪧 Matthew Liu UCR Genome-wide association studies of courtship-related morphology in Anna’s hummingbirds
9 🪧 Janis Liu USC A guide to interpreting trait differentiation with genetic variation measures
10 🪧 Jon Mah UCLA Across-host population genetics analysis of common commensal gut microbiota suggests varied trends in demographic history
11 🪧 Dennis Manjaly Joshy UCSB Spatial Variations in Traditional Brain Cell Type Markers in Cortical Regions
12 🪧 Diane Nguyen UCR The Link Between Genetic and Morphological Change In A Long Term Evolutionary Experiment
13 🪧 Sam Mansour & Jenny Wong UCR Phylogenetic inference from low-coverage whole-genome sequences in bee hummingbirds
14 🪧 Michael Overton UCSD Upper bound on the mutational burden imposed by a CRISPR-Cas9 gene drive element
15 🪧 Jill Marzolino UCR The response to selection across hundreds of traits in a century-long barley experiment
16 🪧 Alexandra Samawi UCR Yellow-Rumped Warbler Genomic and Phenotypic Variation Along a Hybrid Zone
17 🪧 Obadiah Mulder USC Agent-Based Network Modeling of Electrical Signaling in B. subtilis Biofilms
18 🪧 Kieran Samuk UCR Oops, All Assumptions! Two Cautionary Tales of Parameter (Mis)estimation
19 🪧 Nadje Najar UCR Admixture mapping reveals genomic underpinnings of behavioral courtship display elements in hybridizing Selasphorus hummingbirds
20 🪧 Breanna Takacs UCSB Investigating the role of developmental epigenetic regulation in human brain evolution
21 🪧 Evan Shimota UCR Genetics of social structure and sex ratio in the ant Formica exsecta
22 🪧 Kaitlyn Villa UCR Yellow-Rumped Warbler Genomic and Phenotypic Variation Along a Hybrid Zone
23 🪧 Michael Wasney UCLA Microbiome diversity along the tract of the gut
24 🪧 Yongyi Wen UCR Uncovering the genomic footprint of adaptation in a century old barley cultivar
25 🪧 Richard Wolff UCLA Long-term maintenance of fine-scale genetic diversity in the human gut microbiome
26 🪧 Jen-Yu Wang UCI The Evolution Trends of Structural Variants in Drosophila melanogaster Populations
27 🪧 Zul Alam UCR The evolution of a miniaturizing supergene: insights from multiple Formica ant species